Commit 8a6f6ab8 authored by Bagueneau Mathias's avatar Bagueneau Mathias
Browse files

- Bug fix

- Update install.R
parent c1798a56
......@@ -280,16 +280,17 @@ server <- function(input, output, session) {
selectInput(inputId="file", label="Or choose a file :", choices = c("",list.files(path = "./data",full.names = FALSE,recursive = FALSE)))
})
# ## Creating a usefull object for filedata (readable & writable) and assay gestion --------
# wrfile <- reactive ({
# wrdata <- filedata$data
# if (!is.null(wrdata@assays$SCT)) {
# DefaultAssay(wrdata) <- "SCT"
# } else {
# DefaultAssay(wrdata) <- "RNA"
# }
# return (wrdata)
# })
## Creating a usefull object for filedata (readable & writable) and assay gestion --------
wrfile <- reactive ({
req(filedata$data)
wrdata <- filedata$data
if (!is.null(wrdata@assays$SCT)) {
DefaultAssay(wrdata) <- "SCT"
} else {
DefaultAssay(wrdata) <- "RNA"
}
return (wrdata)
})
## Graphs & one table Generations --------
......
......@@ -23,5 +23,4 @@ devtools::install_github(repo = 'ChristophH/sctransform')
BiocManager::install("clusterProfiler")
BiocManager::install("MAST")
BiocManager::install("org.Hs.eg.db")
BiocManager::install("PANTHER.db")
# BiocManager::install("topGO")
\ No newline at end of file
BiocManager::install("PANTHER.db")
\ No newline at end of file
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