Commit a46ac9a7 authored by Jean-Baptiste ALBERGE's avatar Jean-Baptiste ALBERGE
Browse files

added conda install

parent 41531484
......@@ -28,6 +28,19 @@ shiny::runApp('/my/path/to/my/folder/which/contain/all/the/files')
The .rds files used must have been made with the analysis pipeline available at this adress :
## Conda install
To install SChnurR in a conda environment, run the following commands:
conda create -n schnurr -c conda-forge -c bioconda r=3.5 \
r-shiny r-shinythemes r-seurat r-viridis r-shinyjs r-plotly \
r-shinydashboard r-stringr r-dt r-rcolorbrewer r-data.table \
r-biocmanager bioconductor-mast \
bioconductor-panther.db bioconductor-topgo
# TODO add clusterprofiler
## Required Packages
Here the list of the required packages for Shiny SChnurR :
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