Commit 75b9afe5 authored by Audrey BIHOUEE's avatar Audrey BIHOUEE
Browse files

Update config.json

parent 8f0fa15d
......@@ -11,27 +11,15 @@
},
"replicates":{
"J0_CTRL": {
"name":"J0_CTRL",
"samples":["1_J0-1-ctrl","6_J0-2-ctrl","11_J0-3-ctrl"]
"CT": {
"name":"CT",
"samples":["80_CT_1_chr22","81_CT_2_chr22","82_CT_3_chr22","83_CT_4_chr22"]
},
"J3_CTRL": {
"name":"J3_CTRL",
"samples":["2_J3-1-ctrl","7_J3-2-ctrl","12_J3-3-ctrl"]
},
"J6_CTRL": {
"name":"J6_CTRL",
"samples":["4_J6-1-ctrl","9_J6-2-ctrl","14_J6-3-ctrl"]
},
"J3_LSD1": {
"name":"J3_LSD1",
"samples":["3_J3-1-LSD1","8_J3-2-LSD1","13_J3-3-LSD1"]
},
"J6_LSD1": {
"name":"J6_LSD1",
"samples":["5_J6-1-LSD1","10_J6-2-LSD1","15_J6-3-LSD1"]
"BEZ": {
"name":"BEZ",
"samples":["96_BEZ_1_chr22","97_BEZ_2_chr22","98_BEZ_3_chr22","99_BEZ_4_chr22"]
}
},
},
"prinseq-meanquality":"30",
"cutadapt-forward":"AGATCGGAAGAGCACACGTCTGAACTCCAGTCAC",
"cutadapt-reverse":"AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATT",
......
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