Commit 8117bc65 authored by Damien VINTACHE's avatar Damien VINTACHE
Browse files

work only in worksapce directory

parent 43008d7c
#!/bin/bash
# usage : bash executePipeline.sh WORKSPACE SNAKEMAKE_JOBS
echo "WORKSPACE=$2"
echo "SNAKEMAKE_JOBS=$3"
echo "WORKSPACE=$1"
echo "SNAKEMAKE_JOBS=$2"
export PATH=${1}/miniconda/bin:$PATH
echo $PATH
......
......@@ -2,6 +2,7 @@
# usage : bash scripts/setupConda.sh JENKINS_WORKSPACE
# list directory contents for the Jenkins worskspace directory
echo "JENKINS_WORKSPACE=$1"
ls -al ${1}
# remove conda environments
......
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