Commit c5bfb91b authored by Damien VINTACHE's avatar Damien VINTACHE
Browse files

add openjdk, libxrender, libxext, libsm

parent ecf5f312
......@@ -2,6 +2,6 @@
# creation de l'environnement conda
echo $PATH
conda create -yq -n deseq2 bioconductor-deseq2 bioconductor-biomart -c bioconda
conda create -yq -n deseq2 bioconductor-deseq2 bioconductor-biomart xorg-libxrender xorg-libxext xorg-libsm -c conda-forge -c bioconda
conda create -yq -n rnaSeqQuantif snakemake perl openjdk>8.0.121 fastqc multiqc cutadapt prinseq star htseq gzip ncurses -c bioconda -c conda-forge -c ostrokach
conda create -yq -n rnaSeqQuantif snakemake perl openjdk fastqc multiqc cutadapt prinseq star htseq gzip ncurses -c bioconda -c conda-forge -c ostrokach
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