fixed clusterprofiler update in conda env and added medium fastq project.json

CONDA/rna.yml

@@ -35,9 +35,11 @@ dependencies:
   - r-gplots
   - r-fdrtool
   - r-pvclust
+  - r-rvcheck=0.1.8
   - bioconductor-deseq2
   - bioconductor-limma
-  - bioconductor-go.db
+  - bioconductor-go.db=*.*=r4*
+  - bioconductor-do.db=*.*=r4*
   - bioconductor-gseabase
   - bioconductor-clusterprofiler
   - bioconductor-dose

CONFIG/config.json

@@ -4,7 +4,7 @@
         "prinseq-meanquality":"30",
         "cutadapt-forward":"AGATCGGAAGAGCACACGTCTGAACTCCAGTCAC",
         "cutadapt-reverse":"AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATT",
-        "library-type":"reverse",
+        "library-type":"first-strand",
         "read-length":"100",
         "align-cpu":"1",
         "reference":