Commit eded983e authored by Eric CHARPENTIER's avatar Eric CHARPENTIER 🐍
Browse files

fixed clusterprofiler update in conda env and added medium fastq project.json

parent 30c3015b
...@@ -35,9 +35,11 @@ dependencies: ...@@ -35,9 +35,11 @@ dependencies:
- r-gplots - r-gplots
- r-fdrtool - r-fdrtool
- r-pvclust - r-pvclust
- r-rvcheck=0.1.8
- bioconductor-deseq2 - bioconductor-deseq2
- bioconductor-limma - bioconductor-limma
- bioconductor-go.db - bioconductor-go.db=*.*=r4*
- bioconductor-do.db=*.*=r4*
- bioconductor-gseabase - bioconductor-gseabase
- bioconductor-clusterprofiler - bioconductor-clusterprofiler
- bioconductor-dose - bioconductor-dose
......
...@@ -4,7 +4,7 @@ ...@@ -4,7 +4,7 @@
"prinseq-meanquality":"30", "prinseq-meanquality":"30",
"cutadapt-forward":"AGATCGGAAGAGCACACGTCTGAACTCCAGTCAC", "cutadapt-forward":"AGATCGGAAGAGCACACGTCTGAACTCCAGTCAC",
"cutadapt-reverse":"AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATT", "cutadapt-reverse":"AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATT",
"library-type":"reverse", "library-type":"first-strand",
"read-length":"100", "read-length":"100",
"align-cpu":"1", "align-cpu":"1",
"reference": "reference":
......
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