Since implementation of cutadapt, fastqc uses basename of samples with _trim
Need to remove the "_trim" when executing fastqc on fastq trimmed by cutadapt. This only impacts the name of the samples in the report for the fastqc and multiqc graphs.
Need to remove the "_trim" when executing fastqc on fastq trimmed by cutadapt. This only impacts the name of the samples in the report for the fastqc and multiqc graphs.