SRP-pipeline merge requestshttps://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/merge_requests2018-04-26T14:00:00Zhttps://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/merge_requests/2added js, css and everything for report creation2018-04-26T14:00:00ZMathieu ROUELadded js, css and everything for report creationhttps://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/merge_requests/3added updated dge.yml2018-04-27T15:28:58ZMathieu ROUELadded updated dge.ymlhttps://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/merge_requests/4Mathieu dev2018-05-23T08:10:08ZMathieu ROUELMathieu devhttps://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/merge_requests/5Mathieu dev2018-06-07T07:40:13ZMathieu ROUELMathieu devhttps://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/merge_requests/6rule all multiqc removed and added into html rule2018-06-08T13:55:36ZMathieu ROUELrule all multiqc removed and added into html rulehttps://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/merge_requests/7ACP, Pearson Heatmap and SummaryDE links added for the HTML report2018-06-18T09:18:41ZMathieu ROUELACP, Pearson Heatmap and SummaryDE links added for the HTML reporthttps://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/merge_requests/8Fastqc links added with django framework2018-06-25T09:11:34ZMathieu ROUELFastqc links added with django frameworkhttps://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/merge_requests/9nav menu collapse, update of run infos display, improvement of the collapse o...2018-07-17T15:32:53ZMathieu ROUELnav menu collapse, update of run infos display, improvement of the collapse option for the tablehttps://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/merge_requests/10MA-plot, Volcano-plot and cluster DE results in nav bar sorted by versus con...2018-08-07T12:31:27ZMathieu ROUELMA-plot, Volcano-plot and cluster DE results in nav bar sorted by versus conditionhttps://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/merge_requests/11Merge platforme into master2018-10-10T09:31:22ZEric CHARPENTIERMerge platforme into masterhttps://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/merge_requests/12Update CONDA/dgeDE.yml2019-02-15T16:31:22ZPhilippe BORDRONUpdate CONDA/dgeDE.ymlhttps://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/merge_requests/13Correct https://gitlab.univ-nantes.fr/bird_pipeline_registry/DGE-pipeline/iss...2019-04-26T08:56:09ZPhilippe BORDRONCorrect https://gitlab.univ-nantes.fr/bird_pipeline_registry/DGE-pipeline/issues/9https://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/merge_requests/14Ggvulcano2019-04-29T12:36:56ZEric CHARPENTIERGgvulcanohttps://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/merge_requests/15Fix dge.yml2019-05-03T10:18:13ZPhilippe BORDRONFix dge.ymlCorrect following error
```
ResolvePackageNotFound:
- matplotlib==2.2.3=py36h8e2386c_0
```Correct following error
```
ResolvePackageNotFound:
- matplotlib==2.2.3=py36h8e2386c_0
```https://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/merge_requests/16fix conda env file and library installation2019-06-26T11:46:05ZPhilippe BORDRONfix conda env file and library installationBecause conda is brokenBecause conda is brokenhttps://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/merge_requests/17Refactor conda2019-11-22T13:49:49ZEric CHARPENTIERRefactor condahttps://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/merge_requests/18update MA-plot and volcano plot2020-03-24T15:04:27ZPhilippe BORDRONupdate MA-plot and volcano plotMake MA-plot and Volcano plot easier to readMake MA-plot and Volcano plot easier to readhttps://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/merge_requests/19Interactive graph2020-06-03T12:43:58ZPhilippe BORDRONInteractive graphAdd an interactive layer on MA and Volcano plots that gives gene names when hovering on dots on the graph (even for non-labeled genes).
MA plot and Volcano plots are vectorial now, it is then possible to copy text (in particular gene na...Add an interactive layer on MA and Volcano plots that gives gene names when hovering on dots on the graph (even for non-labeled genes).
MA plot and Volcano plots are vectorial now, it is then possible to copy text (in particular gene names) that is printed in the plots and plots scale with resizing the page.https://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/merge_requests/21fix https://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/issue...2020-05-29T12:45:25ZPhilippe BORDRONfix https://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/issues/16https://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/merge_requests/22fix https://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/issue...2020-05-29T12:44:52ZPhilippe BORDRONfix https://gitlab.univ-nantes.fr/bird_pipeline_registry/srp-pipeline/-/issues/17