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Last edited by Eric Charpentier Mar 29, 2022
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Home

3'SRP

The 3'Sequencing RNA Profiling is a low-cost and efficient technique to assess the differentially expressed genes between sample conditions and to evaluate transcriptomic profiles. It is performed on the GenoBiRD core facilities.

  • Get a brief overview of the principles
  • Get into more detail concerning the experimental protocol ⚠ 🚧
  • Have a look at how the analysis is performed in details
  • Acknowledgements
  • Citations & Publications
Clone repository

Home page

The principles

Using the pipeline

  • Requirements & Setup
  • Testing the installation
  • Input files
  • Creating a manual reference
  • Running the pipeline
  • Analyzing multiple plates
  • Re-analyzing data

Step by step explanation

  • Primary Analysis
  • Secondary Analysis
  • Tertiary Analysis
  • The Report

Output files & folders

Acknowledgements

Citations & Publications