Explore projects

project to store myeloma-5hmc paper code

From fastq to Allelic expression with GATK

ATACseq pipeline

Workflow designed to use biobakery tools for functional and taxonomic profiling of shotgun metagenomic data.

Bulk RNA-seq secondary analysis workflow

Get ChEBI ids present in given specie(s). Those scripts were developed during the Hackathon MoDaL Biogenouest 2021 https://biogenouest.github.io/biogen-hack-2020/M2A.html

M2 Degre project have to aim to isolate CNV share by patient from family with possibility to filter CNV on lenght, frequency from GnomAD v2.1.1 and interest genome region. Develop by Romain LAUNAY and Pierre OLCHESQUI with participation of Xavier L G

An R language library which optimize colors categories assignment in the case of categorical visualizations.

Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders

Easy-HLA website repository

Atac-Seq pipeline in snakemake

Atac-Seq pipeline in snakemake