cont

ParseDbSnp.java

-import gov.nih.nlm.ncbi.snp.docsum.*;
+import https.www_ncbi_nlm_nih_gov.snp.docsum.*;
 import javax.xml.bind.*;
 import javax.xml.stream.*;
 import javax.xml.stream.events.*;
@@ -6,7 +6,7 @@ class ParseDbSnp
   {
   public static void main(String[] args) throws Exception
   	{
-  	JAXBContext jaxbCtxt=JAXBContext.newInstance("gov.nih.nlm.ncbi.snp.docsum");
+  	JAXBContext jaxbCtxt=JAXBContext.newInstance("https.www_ncbi_nlm_nih_gov.snp.docsum");
 	Unmarshaller unmarshaller=jaxbCtxt.createUnmarshaller();
 	XMLInputFactory ifactory = XMLInputFactory.newInstance();
 	XMLEventReader r= ifactory.createXMLEventReader(System.in);

tdncbi.tex

@@ -1616,7 +1616,8 @@ ementFormDefault="qualified" attributeFormDefault="unqualified">
 \subsubsection{Compiling the XML Schema for dbSNP with XJC}
 
 \begin{lstlisting}[language=bash,basicstyle=\tiny,breaklines=false]
-$ xjc -d . "ftp://ftp.ncbi.nlm.nih.gov/snp/specs/docsum_3.3.xsd"
+$ wget -O docsum_3.4.xsd "ftp://ftp.ncbi.nlm.nih.gov/snp/specs/docsum_3.4.xsd"
+$ xjc -d . docsum_3.4.xsd
 parsing a schema...
 compiling a schema...
 gov/nih/nlm/ncbi/snp/docsum/Assay.java
@@ -1646,7 +1647,7 @@ gov/nih/nlm/ncbi/snp/docsum/package-info.java
 Search the non-genomic rs\# in dbSNP.
 
 \begin{lstlisting}[language=java,basicstyle=\tiny]
-import gov.nih.nlm.ncbi.snp.docsum.*;
+import https.www_ncbi_nlm_nih_gov.snp.docsum.*;
 import javax.xml.bind.*;
 import javax.xml.stream.*;
 import javax.xml.stream.events.*;
@@ -1654,7 +1655,7 @@ class ParseDbSnp
   {
   public static void main(String[] args) throws Exception
   	{
-  	JAXBContext jaxbCtxt=JAXBContext.newInstance("gov.nih.nlm.ncbi.snp.docsum");
+  	JAXBContext jaxbCtxt=JAXBContext.newInstance("https.www_ncbi_nlm_nih_gov.snp.docsum");
 	Unmarshaller unmarshaller=jaxbCtxt.createUnmarshaller();
 	XMLInputFactory ifactory = XMLInputFactory.newInstance();
 	XMLEventReader r= ifactory.createXMLEventReader(System.in);
@@ -1682,7 +1683,7 @@ class ParseDbSnp
 \subsubsection{Compiling the XML Schema for dbSNP with XJC}
 compile...
 \begin{lstlisting}[language=bash,basicstyle=\tiny,breaklines=false]
-$ javac ParseDbSnp.java gov/nih/nlm/ncbi/snp/docsum/*.java
+$ javac ParseDbSnp.java https/www_ncbi_nlm_nih_gov/snp/docsum/*.java
 \end{lstlisting}
 and run...
 \begin{lstlisting}[language=bash,basicstyle=\tiny,breaklines=false]