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Snakemake pipeline to launch perform minimum generation time analysis.

Memory efficient model cloning approach using data sharing.

Based on the Eclipse Modeling Framework (EMF).

Moclodash stands for "Model cloning with data sharing".

Musclemotion repo for easy sharing and modifying

HLAfix (HLA Functional Immunogenomic eXploration): HLA analysis R package designed to perform powerful HLA alleles association with traits. alpha version.

From fastq to Allelic expression with GATK

R functions that provide utilities for RNA-Seq analyses.

This pipeline aims to provide unsupervised data analysis from Singlecell RNAseq data. The alignment is done with Tophat2 followed by htseqcount. After filtering, DeSeq2 and Vst are applied. Finally, the unsupervised analysis is done with WGCNA.

RNAseq pipeline for gene expression quantification.

M2 Degre project have to aim to isolate CNV share by patient from family with possibility to filter CNV on lenght, frequency from GnomAD v2.1.1 and interest genome region. Develop by Romain LAUNAY and Pierre OLCHESQUI with participation of Xavier L G