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# Metagenomic samples mOTUs profiling #
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mOTUs are operational taxonomic unit based on 10 universal markers genes (MGs). The motus module run [mOTUs](https://motu-tool.org/index.html), a dedicated tool for mOTUs profiling.
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This mOTU profiler (2.5.0) map reads against a database made of 2297 meta-mOTUs (fetch from public metagenomes, mOTUs without known reference) and of 11915 ref-mOTUs (fetch from public reference genomes). Alignement provide abundance estimation and taxonomic annotation of reads. See [mOTUs documentation](https://github.com/motu-tool/mOTUs_v2) for details.
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The motus module profile each samples then merge profiles.
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genosysmics run motus **snakemake.args
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output :
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motus_profiling/
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├── profiles
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│ ├── sample1.motus
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│ ├── sample2.motus
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│ └── sample3.motus
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└── mOTU_table.tsv
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