Explore projects

Snakemake for 3' Sequencing RNA Profiling analysis. https://bio.tools/3SRP

This pipeline aims to provide unsupervised data analysis from Singlecell RNAseq data. The alignment is done with Tophat2 followed by htseqcount. After filtering, DeSeq2 and Vst are applied. Finally, the unsupervised analysis is done with WGCNA.

RNAseq pipeline for gene expression quantification.

Custom STAC browser to distribute the Osuna STAC catalogs