Explore projects
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adrien / RefMasker
GNU General Public License v2.0 or laterUpdated -
adrien / Sekator
GNU General Public License v2.0 or laterUpdated -
adrien / Quade
GNU General Public License v2.0 or laterUpdated -
adrien / ContaVect
GNU General Public License v2.0 or laterUpdated -
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bird_pipeline_registry / SRP-pipeline
GNU General Public License v3.0 or laterSnakemake for 3' Sequencing RNA Profiling analysis. https://bio.tools/3SRP
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Pipeline for exome sequencing with snakemake (BWA->HaplotypeCaller->VEP+GnomAD)
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This pipeline aims to provide unsupervised data analysis from Singlecell RNAseq data. The alignment is done with Tophat2 followed by htseqcount. After filtering, DeSeq2 and Vst are applied. Finally, the unsupervised analysis is done with WGCNA.
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bird_pipeline_registry / RNAseq-quantif-pipeline
GNU General Public License v3.0 or laterRNAseq pipeline for gene expression quantification.
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